FastQCFastQC Report
Mon 26 Feb 2024
P7741_R1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameP7741_R1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences273071
Total Bases61.7 Mbp
Sequences flagged as poor quality0
Sequence length35-251
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16930.6199852785539293No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3610.1322000505363074No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)